Conjugative transfer of a derivative of the IncP-1α plasmid RP4 and establishment of transconjugants in the indigenous bacterial community of poplar plants.
Identifieur interne : 001E36 ( Main/Exploration ); précédent : 001E35; suivant : 001E37Conjugative transfer of a derivative of the IncP-1α plasmid RP4 and establishment of transconjugants in the indigenous bacterial community of poplar plants.
Auteurs : Andreas Ulrich [Allemagne] ; Regina Becker [Allemagne] ; Kristina Ulrich [Allemagne] ; Dietrich Ewald [Allemagne]Source :
- FEMS microbiology letters [ 1574-6968 ] ; 2015.
Descripteurs français
- KwdFr :
- ADN bactérien (MeSH), Conjugaison génétique (MeSH), Consortiums microbiens (génétique), Phylogenèse (MeSH), Plasmides (MeSH), Populus (microbiologie), Proteobacteria (classification), Proteobacteria (génétique), Proteobacteria (isolement et purification), Réaction de polymérisation en chaine en temps réel (MeSH), Transfert horizontal de gène (MeSH).
- MESH :
- génétique : Consortiums microbiens, Proteobacteria.
- isolement et purification : Proteobacteria.
- microbiologie : Populus.
- ADN bactérien, Conjugaison génétique, Phylogenèse, Plasmides, Proteobacteria, Réaction de polymérisation en chaine en temps réel, Transfert horizontal de gène.
English descriptors
- KwdEn :
- Conjugation, Genetic (MeSH), DNA, Bacterial (MeSH), Gene Transfer, Horizontal (MeSH), Microbial Consortia (genetics), Phylogeny (MeSH), Plasmids (MeSH), Populus (microbiology), Proteobacteria (classification), Proteobacteria (genetics), Proteobacteria (isolation & purification), Real-Time Polymerase Chain Reaction (MeSH).
- MESH :
- chemical : DNA, Bacterial.
- classification : Proteobacteria.
- genetics : Microbial Consortia, Proteobacteria.
- isolation & purification : Proteobacteria.
- microbiology : Populus.
- Conjugation, Genetic, Gene Transfer, Horizontal, Phylogeny, Plasmids, Real-Time Polymerase Chain Reaction.
Abstract
The persistence of traits introduced into the indigenous bacterial community of poplar plants was investigated using bioluminescence mediated by the luc gene. Three endophytic bacterial strains provided with the IncP-1α plasmid RP4-Tn-luc were used to inoculate poplar cuttings at different phenological stages. Screening of isolates by bioluminescence and real-time PCR detection of the luc gene revealed stable persistence for at least 10 weeks. Although the inoculated strains became established with a high population density after inoculation at leaf development (April) and senescence (October), the strains were suppressed by the indigenous bacteria at stem elongation (June). Transconjugants could be detected only at this phenological stage. Indigenous bacteria harbouring RP4-Tn-luc became established with densities ranging from 2 × 10(5) to 9 × 10(6) CFU g(-1) fresh weight 3 and 10 weeks after inoculation. The increased colonization of the cuttings by indigenous bacteria at stem elongation seemed to strongly compete with the introduced strains. Otherwise, the phenological stage of the plants as well as the density of the indigenous recipients could serve as the driver for a more frequent conjugative plasmid transfer. A phylogenetic assignment of transconjugants indicated the transfer of RP4-Tn-luc into six genera of Proteobacteria, mainly Sphingomonas, Stenotrophomonas and Xanthomonas.
DOI: 10.1093/femsle/fnv201
PubMed: 26490946
PubMed Central: PMC4643746
Affiliations:
Links toward previous steps (curation, corpus...)
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microbiology letters</title><idno type="eISSN">1574-6968</idno><imprint><date when="2015" type="published">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Conjugation, Genetic (MeSH)</term><term>DNA, Bacterial (MeSH)</term><term>Gene Transfer, Horizontal (MeSH)</term><term>Microbial Consortia (genetics)</term><term>Phylogeny (MeSH)</term><term>Plasmids (MeSH)</term><term>Populus (microbiology)</term><term>Proteobacteria (classification)</term><term>Proteobacteria (genetics)</term><term>Proteobacteria (isolation & purification)</term><term>Real-Time Polymerase Chain Reaction (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN bactérien (MeSH)</term><term>Conjugaison génétique (MeSH)</term><term>Consortiums microbiens (génétique)</term><term>Phylogenèse (MeSH)</term><term>Plasmides (MeSH)</term><term>Populus (microbiologie)</term><term>Proteobacteria (classification)</term><term>Proteobacteria (génétique)</term><term>Proteobacteria (isolement et purification)</term><term>Réaction de polymérisation en chaine en temps réel (MeSH)</term><term>Transfert horizontal de gène (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" xml:lang="en"><term>DNA, Bacterial</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Proteobacteria</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Microbial Consortia</term><term>Proteobacteria</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Consortiums microbiens</term><term>Proteobacteria</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Proteobacteria</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Proteobacteria</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Populus</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Populus</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Conjugation, Genetic</term><term>Gene Transfer, Horizontal</term><term>Phylogeny</term><term>Plasmids</term><term>Real-Time Polymerase Chain Reaction</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>ADN bactérien</term><term>Conjugaison génétique</term><term>Phylogenèse</term><term>Plasmides</term><term>Proteobacteria</term><term>Réaction de polymérisation en chaine en temps réel</term><term>Transfert horizontal de gène</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The persistence of traits introduced into the indigenous bacterial community of poplar plants was investigated using bioluminescence mediated by the luc gene. Three endophytic bacterial strains provided with the IncP-1α plasmid RP4-Tn-luc were used to inoculate poplar cuttings at different phenological stages. Screening of isolates by bioluminescence and real-time PCR detection of the luc gene revealed stable persistence for at least 10 weeks. Although the inoculated strains became established with a high population density after inoculation at leaf development (April) and senescence (October), the strains were suppressed by the indigenous bacteria at stem elongation (June). Transconjugants could be detected only at this phenological stage. Indigenous bacteria harbouring RP4-Tn-luc became established with densities ranging from 2 × 10(5) to 9 × 10(6) CFU g(-1) fresh weight 3 and 10 weeks after inoculation. The increased colonization of the cuttings by indigenous bacteria at stem elongation seemed to strongly compete with the introduced strains. Otherwise, the phenological stage of the plants as well as the density of the indigenous recipients could serve as the driver for a more frequent conjugative plasmid transfer. A phylogenetic assignment of transconjugants indicated the transfer of RP4-Tn-luc into six genera of Proteobacteria, mainly Sphingomonas, Stenotrophomonas and Xanthomonas. </div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">26490946</PMID><DateCompleted><Year>2016</Year><Month>08</Month><Day>16</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1574-6968</ISSN><JournalIssue CitedMedium="Internet"><Volume>362</Volume><Issue>23</Issue><PubDate><Year>2015</Year><Month>Dec</Month></PubDate></JournalIssue><Title>FEMS microbiology letters</Title><ISOAbbreviation>FEMS Microbiol Lett</ISOAbbreviation></Journal><ArticleTitle>Conjugative transfer of a derivative of the IncP-1α plasmid RP4 and establishment of transconjugants in the indigenous bacterial community of poplar plants.</ArticleTitle><Pagination><MedlinePgn>fnv201</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1093/femsle/fnv201</ELocationID><ELocationID EIdType="pii" ValidYN="Y">fnv201</ELocationID><Abstract><AbstractText>The persistence of traits introduced into the indigenous bacterial community of poplar plants was investigated using bioluminescence mediated by the luc gene. Three endophytic bacterial strains provided with the IncP-1α plasmid RP4-Tn-luc were used to inoculate poplar cuttings at different phenological stages. Screening of isolates by bioluminescence and real-time PCR detection of the luc gene revealed stable persistence for at least 10 weeks. Although the inoculated strains became established with a high population density after inoculation at leaf development (April) and senescence (October), the strains were suppressed by the indigenous bacteria at stem elongation (June). Transconjugants could be detected only at this phenological stage. Indigenous bacteria harbouring RP4-Tn-luc became established with densities ranging from 2 × 10(5) to 9 × 10(6) CFU g(-1) fresh weight 3 and 10 weeks after inoculation. The increased colonization of the cuttings by indigenous bacteria at stem elongation seemed to strongly compete with the introduced strains. Otherwise, the phenological stage of the plants as well as the density of the indigenous recipients could serve as the driver for a more frequent conjugative plasmid transfer. A phylogenetic assignment of transconjugants indicated the transfer of RP4-Tn-luc into six genera of Proteobacteria, mainly Sphingomonas, Stenotrophomonas and Xanthomonas. </AbstractText><CopyrightInformation>© FEMS 2015.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Ulrich</LastName><ForeName>Andreas</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Leibniz Centre for Agricultural Landscape Research (ZALF), Institute for Landscape Biogeochemistry, D-15374 Müncheberg, Germany aulrich@zalf.de.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Becker</LastName><ForeName>Regina</ForeName><Initials>R</Initials><AffiliationInfo><Affiliation>Leibniz Centre for Agricultural Landscape Research (ZALF), Institute for Landscape Biogeochemistry, D-15374 Müncheberg, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ulrich</LastName><ForeName>Kristina</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Johann Heinrich von Thünen-Institute, Federal Research Institute for Rural Areas, Forestry and Fisheries, Institute of Forest Genetics, Waldsieversdorf D-15377, Germany.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ewald</LastName><ForeName>Dietrich</ForeName><Initials>D</Initials><AffiliationInfo><Affiliation>Johann Heinrich von Thünen-Institute, Federal Research Institute for Rural Areas, Forestry and Fisheries, Institute of Forest Genetics, Waldsieversdorf D-15377, Germany.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2015</Year><Month>10</Month><Day>20</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>FEMS Microbiol Lett</MedlineTA><NlmUniqueID>7705721</NlmUniqueID><ISSNLinking>0378-1097</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004269">DNA, Bacterial</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D003227" MajorTopicYN="Y">Conjugation, Genetic</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004269" MajorTopicYN="N">DNA, Bacterial</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D022761" MajorTopicYN="N">Gene Transfer, Horizontal</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D059013" MajorTopicYN="N">Microbial Consortia</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010957" MajorTopicYN="N">Plasmids</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D020560" MajorTopicYN="N">Proteobacteria</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D060888" MajorTopicYN="N">Real-Time Polymerase Chain Reaction</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">IncP-1</Keyword><Keyword MajorTopicYN="N">Populus</Keyword><Keyword MajorTopicYN="N">RP4</Keyword><Keyword MajorTopicYN="N">bacterial community composition</Keyword><Keyword MajorTopicYN="N">horizontal gene transfer</Keyword><Keyword MajorTopicYN="N">plant-associated bacteria</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="accepted"><Year>2015</Year><Month>10</Month><Day>16</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2015</Year><Month>10</Month><Day>23</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2015</Year><Month>10</Month><Day>23</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2016</Year><Month>8</Month><Day>17</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">26490946</ArticleId><ArticleId IdType="pii">fnv201</ArticleId><ArticleId 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last="Ulrich">Andreas Ulrich</name></noRegion><name sortKey="Becker, Regina" sort="Becker, Regina" uniqKey="Becker R" first="Regina" last="Becker">Regina Becker</name><name sortKey="Ewald, Dietrich" sort="Ewald, Dietrich" uniqKey="Ewald D" first="Dietrich" last="Ewald">Dietrich Ewald</name><name sortKey="Ulrich, Kristina" sort="Ulrich, Kristina" uniqKey="Ulrich K" first="Kristina" last="Ulrich">Kristina Ulrich</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PoplarV1/Data/Main/Exploration
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Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= PoplarV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:26490946
|texte= Conjugative transfer of a derivative of the IncP-1α plasmid RP4 and establishment of transconjugants in the indigenous bacterial community of poplar plants.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:26490946" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a PoplarV1
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